Owen Griere / Private
Lab Book
Research notes, project reports, internship documents and monthly diaries. You are authenticated for this session.
Projects
Ongoing and past research projects organized by domain. Documents will be made available as they are finalized.
Transnational cancer research initiative. Spatial transcriptomics and multi-omics integration for tumor microenvironment characterization across cohorts.
Imaging Mass Cytometry analysis of pancreatic ductal adenocarcinoma samples from the Lawrence lab. High-dimensional spatial phenotyping of immune and stromal cell populations.
High-plex immunofluorescence from MACSima technology, we perform imaging pipeline for multiplexed protein detection in tumor tissue sections. Analysis and visualization workflows.
Tool for building and visualizing interaction network graphs from spatial transcriptomics data. Enables cell–cell communication analysis at tissue scale.
Agent-based modeling of the pancreatic cancer tumor microenvironment using PhysiCell. Simulates cellular dynamics, immune infiltration, and stromal interactions in 3D tissue.
Internships
Master's internship reports, monthly diaries, and coursework documents.
Master's internship at the Cancer Research Center of Toulouse (CRCT, Inserm). Research on the pancreatic cancer tumor microenvironment using spatial omics and computational modeling.